Host Godaddy
FTP Client Winscp
Connection: Regular old FTP
It will only list 10K files and even if you select the folder itself to download it will only contain 10K files, at least that's the results I got with WinSCP. There is no warning in the FTP client unless I somehow missed it and the only indication anything is up is the FTP logs.
Based on what I'm reading that file count can be more or less but that's the default. The obvious solution is use SFTP but if you are using FTP this is a heads up.226 Output truncated to 10000 matches